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Purchased a product from ATCC? Enter in the lot number to download the omics data or learn more about our supporting memberships here.
Overview
Related Genomes
Quality Control
Organism Summary | |
|---|---|
| Catalog Number | ATCC® VR-1995™ |
| Strain Alias | Purdue (attenuated) |
| Isolation | Small intestine of infected pig with mild diarrhea |
| Biosafety Level | 2 |
Assembly Summary | |
|---|---|
| Date Published | September 2, 2021 |
| Length | 28,548 nt |
| Sequencing Technology | Illumina |
| Number of Contigs | 1 (0 Circularized) |
| Assembly Level | Complete |
| N50 | 28,548 nt |
| %GC | 37.61% |
Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 0 |
| Oxford Nanopore Median Q Score | 0 |
| Illumina Read Count | 832,636 |
| Illumina Mean Coverage Depth | 281.679× |
| Illumina Median Q Score | 38 |
Most similar genomes
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
All Microbes
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length |
|---|
Displaying Product
Sequencing Quality Control
Sequencing Quality Control Metrics | |
|---|---|
| Median Q score, all bases | 38 |
| Percent of median Q scores per cycle greater than 25 | 1% |
| Ambiguous content (% N bases) | 0% |
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