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- Alphacoronavirus 1
- Transmissible gastroenteritis virus
Transmissible gastroenteritis virus (ATCC® VR-1995™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | September 2, 2021 |
| Length | 28,548 nt |
| Sequencing Technology | Illumina |
| Number of Segments | 1 |
| Assembly Level | Complete |
| N50 | 28,548 nt |
| %GC | 37.61% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-1995™ |
| Isolation | Small intestine of infected pig with mild diarrhea |
| Biosafety Level | 2 |
| Input Reads Summary | |
|---|---|
| Illumina Read Count | 832,636 |
| Illumina Mean Coverage Depth | 281.679× |
| Illumina Median Q Score | 38 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
3 out of 3 passed
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
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