Assembly Summary | |
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Date Published | March 24, 2025 |
Length | 4,628,176 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 2 (All Circularized) |
Assembly Level | Complete |
N50 | 4,277,996 nt |
%GC | 35.04% |
Organism Summary | |
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Name | ATCC® 43642™ |
Isolation | Human blood via guinea pig; isolated by Uhlenhuth and Fromme |
Tags | Type Strain |
Biosafety Level | 2 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 3,739 |
Number of Hypothetical Proteins | 981 |
Number of tRNA | 37 |
Number of 5s rRNA | 1 |
Number of 16s rRNA | 2 |
Number of 23s rRNA | 2 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 104,112 |
Oxford Nanopore Median Q Score | 37 |
Illumina Read Count | 6,624,024 |
Illumina Mean Coverage Depth | 375.79× |
Illumina Median Q Score | 40 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions