Organism Summary | |
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Catalog Number | ATCC® 9478™ |
Strain Alias | NRRL 824 [5112.1, ATCC 8537, CBS 205.57, IMI 15378, LSHB P152, LSHB P57, NCTC 4222, NRRL 1209, QM 6749] |
Isolation | Culture contaminant |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | December 12, 2022 |
Length | 30,544,862 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 11 (0 Circularized) |
N50 | 9,203,919 nt |
%GC | 48.97% |
Annotations Summary | |
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Number of BUSCO Annotations | 755 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 354,908 |
Oxford Nanopore Median Q Score | 23 |
Illumina Read Count | 113,468,004 |
Illumina Mean Coverage Depth | 494.829× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 113,468,004 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 98.94% |
Average depth of coverage | 494.829× |