ATCC® BAA-1832™ | Brachyspira canis

Overview

Genome Browser

Related Genomes

Quality Control

Assembly Summary
Date Published	June 11, 2025
Length	3,077,291 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	3 (0 Circularized)
N50	2,886,326 nt
%GC	28.05%

Organism Summary
Name	ATCC® BAA-1832™
Isolation	Dog; isolated by D Hampson
Tags	Methylation Data
Biosafety Level	2
Type Strain

Annotations Summary
Number of CDS	2739
Number of Hypothetical Proteins	570
Number of tRNA	34
Number of 5s rRNA	1
Number of 16s rRNA	1
Number of 23s rRNA	1

Input Reads Summary
Oxford Nanopore Read Count	184,859
Oxford Nanopore Median Q Score	39
Illumina Read Count	3,302,846
Illumina Mean Coverage Depth	277.484×
Illumina Median Q Score	40

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.

4 out of 4 passed

PassedNumber of trimmed reads3,302,846

PassedMedian Q score, all bases40

PassedPercent of median Q scores per cycle greater than 251%

PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality

3 out of 3 passed

PassedEstimated genome completeness97.92%

PassedEstimated genome contamination0.31%

PassedAverage depth of coverage277.484×

Notes

This bacterium was assembled, annotated, and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions

Brachyspira canis (ATCC® BAA-1832™)