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Overview
Annotations
Related Genomes
Quality Control
| Organism Summary | |
|---|---|
| Catalog Number | ATCC® MYA-4941™ |
| Genotype | MATa AGA1::GAL1-AGA1::URA3 ura3-52 trp1 leu2-delta200 his3-delta200 pep4::HIS3 prbd1.6R can1 GAL |
| Isolation | Parent strain used Saccharoymes cerevisiae BJ5465 |
| Biosafety Level | 1 |
| Assembly Summary | |
|---|---|
| Date Published | December 22, 2020 |
| Length | 12,224,895 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 20 (0 Circularized) |
| N50 | 812,096 nt |
| %GC | 38.17% |
| Annotations Summary | |
|---|---|
| Number of BUSCO Annotations | 732 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 491,246 |
| Oxford Nanopore Median Q Score | 27 |
| Illumina Read Count | 18,266,373 |
| Illumina Mean Coverage Depth | 196.192× |
| Illumina Median Q Score | 37 |
| Contig | Start | End | Protein Product | Type | OrthoDB Group |
|---|
Most similar genomes
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
All Genomes
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
|---|
Displaying Genome
| Sequencing Quality Control | |
|---|---|
| Number of trimmed reads | 18,266,373 |
| Median Q score, all bases | 37 |
| Percent of median Q scores per cycle greater than 25 | 1% |
| Ambiguous content (% N bases) | 0% |
| BUSCO Quality Control | |
|---|---|
| Estimated genome completeness | 89.18% |
| Average depth of coverage | 196.192× |
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