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  • Caulobacter vibrioides

Caulobacter vibrioides (ATCC® BAA-2331™)

Overview
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Related Genomes
Quality Control
Assembly Summary
Date PublishedApril 5, 2023
Length4,117,362 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs1 (All Circularized)
Assembly LevelComplete
N504,117,362 nt
%GC67.25%
Organism Summary
NameATCC® BAA-2331™
IsolationSpontaneous S-layer negative variant of Caulobacter crescentus CB2 (ATCC 15252)
Biosafety Level1
Type StrainNo
Annotations Summary
Number of CDS3,809
Number of Hypothetical Proteins1,887
Number of tRNA60
Number of 5s rRNA2
Number of 16s rRNA2
Number of 23s rRNA2
Input Reads Summary
Oxford Nanopore Read Count53,114
Oxford Nanopore Median Q Score25
Illumina Read Count13,798,517
Illumina Mean Coverage Depth444.357×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads13,798,517
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)-

Assembly Quality Control

Metrics assessing the assembly quality
3/3
3 out of 3 passed
PassedEstimated genome completeness99.68%
PassedEstimated genome contamination0%
PassedAverage depth of coverage444.357×
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