Assembly Summary | |
---|---|
Date Published | September 13, 2024 |
Length | 2,115,583 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 2 (All Circularized) |
Assembly Level | Complete |
N50 | 2,060,303 nt |
%GC | 38.18% |
Organism Summary | |
---|---|
Name | ATCC® 43085™ |
Biosafety Level | 1 |
Type Strain | No |
Antigenic Properties | Lancefield's Group D |
Annotations Summary | |
---|---|
Number of CDS | 2,096 |
Number of Hypothetical Proteins | 242 |
Number of tRNA | 61 |
Number of 5s rRNA | 6 |
Number of 16s rRNA | 5 |
Number of 23s rRNA | 5 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 13,014 |
Oxford Nanopore Median Q Score | 32 |
Illumina Read Count | 12,098,566 |
Illumina Mean Coverage Depth | 849.712× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
---|
No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions