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- Streptomyces bacillaris subgroup
- Streptomyces bacillaris
Streptomyces bacillaris (ATCC® 15855™)
Overview
Genome Browser
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | December 23, 2021 |
| Length | 7,966,076 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 17 (0 Circularized) |
| Assembly Level | Chromosome |
| N50 | 969,887 nt |
| %GC | 71.88% |
| Organism Summary | |
|---|---|
| Name | ATCC® 15855™ |
| Tags | Type Strain |
| Biosafety Level | 1 |
| Type Strain | Yes |
| Annotations Summary | |
|---|---|
| Number of CDS | 6,894 |
| Number of Hypothetical Proteins | 1,085 |
| Number of tRNA | 66 |
| Number of 5s rRNA | 6 |
| Number of 16s rRNA | 6 |
| Number of 23s rRNA | 6 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 519,403 |
| Oxford Nanopore Median Q Score | 23 |
| Illumina Read Count | 11,873,809 |
| Illumina Mean Coverage Depth | 199.593× |
| Illumina Median Q Score | 34 |
| Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
|---|
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
4 out of 4 passed
PassedNumber of trimmed reads11,873,809
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
Assembly Quality Control
Metrics assessing the assembly quality
3 out of 3 passed
PassedEstimated genome completeness99.84%
PassedEstimated genome contamination2.15%
PassedAverage depth of coverage199.593×
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