ATCC® 49930™ | Neisseria animalis

Overview

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Quality Control

Assembly Summary
Date Published	June 11, 2025
Length	2,231,891 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	1 (All Circularized)
N50	2,231,891 nt
%GC	51.85%

Annotations Summary
Number of CDS	2005
Number of Hypothetical Proteins	226
Number of tRNA	63
Number of 5s rRNA	4
Number of 16s rRNA	4
Number of 23s rRNA	4

Input Reads Summary
Oxford Nanopore Read Count	57,781
Oxford Nanopore Median Q Score	40
Illumina Read Count	2,687,216
Illumina Mean Coverage Depth	289.931×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

All Genomes

	Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length	Download

Displaying Genome

Sequencing Quality Control
Number of trimmed reads	2,687,216
Median Q score, all bases	40
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

Assembly Quality Control
Estimated genome completeness	96.87%
Estimated genome contamination	0.67%
Illumina depth of coverage	289.931×
ONT depth of coverage	312.559×

Notes

This bacterium was assembled, annotated, and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions