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- Embecovirus
- Betacoronavirus 1
Betacoronavirus 1 (ATCC® VR-1558™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | June 30, 2020 |
| Length | 30,792 nt |
| Sequencing Technology | Illumina |
| Number of Segments | 1 |
| Assembly Level | Complete |
| N50 | 30,792 nt |
| %GC | 36.75% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-1558™ |
| Isolation | Man with cold-like illness. Treated to remove mycoplasma at ATCC. |
| Biosafety Level | 2 |
| Input Reads Summary | |
|---|---|
| Illumina Read Count | 3,814,126 |
| Illumina Mean Coverage Depth | 1,090.629× |
| Illumina Median Q Score | 38 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
3 out of 3 passed
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0.14%
Notes
This is a small viral genome and while the number of reads does not reach ATCC's target for bacterial genomics, it is sufficient for a high quality assembly.
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