Assembly Summary | |
---|---|
Date Published | March 24, 2025 |
Length | 1,073,622 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 4 (All Circularized) |
Assembly Level | Complete |
N50 | 1,043,877 nt |
%GC | 41.21% |
Organism Summary | |
---|---|
Name | ATCC® VR-571B™ |
Isolation | Conjunctiva from a child with trachoma, human conjunctiva. |
Tags | Type Strain |
Biosafety Level | 2 |
Type Strain | Yes |
Annotations Summary | |
---|---|
Number of CDS | 923 |
Number of Hypothetical Proteins | 158 |
Number of tRNA | 40 |
Number of 5s rRNA | 2 |
Number of 16s rRNA | 2 |
Number of 23s rRNA | 2 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 217,942 |
Oxford Nanopore Median Q Score | 36 |
Illumina Read Count | 6,524,556 |
Illumina Mean Coverage Depth | 593.961× |
Illumina Median Q Score | 40 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
---|
No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions