Organism Summary | |
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Catalog Number | ATCC® VR-1305™ |
Isolation | Rectal swab from 22-year-old male with AIDS. |
Biosafety Level | 2 |
Assembly Summary | |
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Date Published | December 22, 2022 |
Length | 34,802 nt |
Sequencing Technology | Illumina |
Number of Contigs | 1 (0 Circularized) |
Assembly Level | Complete |
N50 | 34,802 nt |
%GC | 57.24% |
Input Reads Summary | |
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Oxford Nanopore Read Count | 0 |
Oxford Nanopore Median Q Score | 0 |
Illumina Read Count | 1,840,346 |
Illumina Mean Coverage Depth | 1,621.828× |
Illumina Median Q Score | 39 |
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Median Q score, all bases | 39 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |