ATCC logoHOMEGENOMESSEQUENCE SEARCH
DOCUMENTATION
  • Neurospora
  • Neurospora sitophila

Neurospora sitophila (ATCC® 56753™)

Overview
Annotations
Related Genomes
Quality Control
Assembly Summary
Date PublishedOctober 31, 2023
Length39,832,753 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs12
Assembly LevelScaffold
N505,191,437 nt
%GC48.57%
Organism Summary
NameATCC® 56753™
Biosafety Level1
Type StrainNo
Annotations Summary
Number of BUSCO Annotations749
Input Reads Summary
Oxford Nanopore Read Count192,181
Oxford Nanopore Median Q Score23
Illumina Read Count70,316,926
Illumina Mean Coverage Depth222.027×
Illumina Median Q Score34
ContigStartEndProtein ProductTypeOrthoDB Group

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads70,316,926
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

BUSCO Quality Control

Metrics assessing the assembly quality (from BUSCO).
2/2
2 out of 2 passed
PassedEstimated genome completeness98.81%
PassedAverage depth of coverage222.027×
Powered byOne Codex
Enhanced Authentication InitiativeData Use AgreementNeed Help? Contact us at ATCC Support
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline