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  • Acetobacter subgen. Acetobacter
  • Acetobacter aceti

Acetobacter aceti (ATCC® 15973™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Level
Date PublishedSeptember 29, 2020
Length3,693,112 nt
Sequencing TechnologyIllumina + Oxford Nanopore
Number of Contigs5 (All Circularized)
Assembly SummaryComplete
N503,596,264 nt
%GC57.06%
Organism Summary
NameATCC® 15973™
IsolationAlcohol turned to vinegar
TagsType Strain
Biosafety Level1
Type StrainYes
Annotations Summary
Number of CDS3,395
Number of Hypothetical Proteins1,631
Number of tRNA51
Number of 5s rRNA3
Number of 16s rRNA3
Number of 23s rRNA3
Input Reads Summary
Oxford Nanopore Read Count18,545
Oxford Nanopore Median Q Score24
Illumina Read Count2,661,682
Illumina Mean Coverage Depth142.325×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads2,661,682
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0%
PassedAverage depth of coverage142.325×
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