Purchased a strain from ATCC? Enter in the lot number to download the genome or learn more about our supporting memberships here.
- unclassified Adeno-associated dependoparvovirus A
- Adeno-associated virus 1
Adeno-associated virus 1 (ATCC® VR-645™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | July 17, 2024 |
| Length | 4,432 nt |
| Sequencing Technology | Illumina |
| Number of Contigs | 1 (0 Circularized) |
| Assembly Level | Complete |
| N50 | 4,432 nt |
| %GC | 55.87% |
| Organism Summary | |
|---|---|
| Name | ATCC® VR-645™ |
| Isolation | Pool of RhMk TC infected with SV-15 virus. |
| Tags | |
| Biosafety Level | 2 |
| Annotations Summary |
|---|
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 0 |
| Oxford Nanopore Median Q Score | 0 |
| Illumina Read Count | 35,482,140 |
| Illumina Mean Coverage Depth | 229,324.169× |
| Illumina Median Q Score | 34 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
3 out of 3 passed
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0.03%
Notes
This virus was assembled and curated using Oatmeal v2.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline