ATCC® MYA-5012™ | Komagataella phaffii

Overview

Annotations

Related Genomes

Quality Control

Assembly Summary
Date Published	December 12, 2025
Length	9,867,390 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	21 (0 Circularized)
N50	1,311,520 nt
%GC	40.64%

Annotations Summary
Number of BUSCO Annotations	925

Input Reads Summary
Oxford Nanopore Read Count	847,703
Oxford Nanopore Median Q Score	40
Illumina Read Count	16,382,104
Illumina Mean Coverage Depth	239.903×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

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		Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length

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Sequencing Quality Control

Sequencing Quality Control Metrics
Number of trimmed reads	16,382,104
Median Q score, all bases	40
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

BUSCO Quality Control Metrics
Estimated genome completeness	82.4%
Average depth of coverage	239.903×

This fungus was assembled, annotated, and curated using Oatmeal v3.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions