Assembly Summary | |
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Date Published | June 13, 2025 |
Length | 5,807,894 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 4 (3 Circularized) |
N50 | 5,346,687 nt |
%GC | 58.49% |
Organism Summary | |
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Name | ATCC® BAA-3259™ |
Isolation | Respiratory sputum |
Tags | |
Biosafety Level | 2 |
Type Strain |
Annotations Summary | |
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Number of CDS | 5564 |
Number of Hypothetical Proteins | 507 |
Number of tRNA | 87 |
Number of 5s rRNA | 8 |
Number of 16s rRNA | 7 |
Number of 23s rRNA | 7 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 121,743 |
Oxford Nanopore Median Q Score | 36 |
Illumina Read Count | 6,754,290 |
Illumina Mean Coverage Depth | 307.175× |
Illumina Median Q Score | 40 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions