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  • Sulfurospirillum
  • Sulfurospirillum deleyianum

Sulfurospirillum deleyianum (ATCC® 51133™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedOctober 30, 2019
Length2,306,355 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs1 (All Circularized)
Assembly LevelComplete
N502,306,355 nt
%GC38.97%
Organism Summary
NameATCC® 51133™
IsolationAnoxic mud of a forest pond
TagsType Strain
Biosafety Level1
Type StrainYes
Annotations Summary
Number of CDS2,281
Number of Hypothetical Proteins1,041
Number of tRNA44
Number of 5s rRNA0
Number of 16s rRNA3
Number of 23s rRNA3
Input Reads Summary
Oxford Nanopore Read Count96,688
Oxford Nanopore Median Q Score25
Illumina Read Count4,282,169
Illumina Mean Coverage Depth360.715×
Illumina Median Q Score38
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads4,282,169
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)-

Assembly Quality Control

Metrics assessing the assembly quality
3/3
3 out of 3 passed
PassedEstimated genome completeness99.87%
PassedEstimated genome contamination0%
PassedAverage depth of coverage360.715×
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