Assembly Summary | |
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Date Published | September 25, 2024 |
Length | 6,409,297 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 16 (0 Circularized) |
Assembly Level | Chromosome |
N50 | 1,837,510 nt |
%GC | 34.67% |
Organism Summary | |
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Name | ATCC® 49358™ |
Isolation | Anaerobic digester fed with poplar wood |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 5,153 |
Number of Hypothetical Proteins | 1,175 |
Number of tRNA | 62 |
Number of 5s rRNA | 7 |
Number of 16s rRNA | 7 |
Number of 23s rRNA | 7 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 246,968 |
Oxford Nanopore Median Q Score | 27 |
Illumina Read Count | 9,444,024 |
Illumina Mean Coverage Depth | 214.676× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions