Organism Summary | |
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Catalog Number | ATCC® 22075™ |
Strain Alias | CBS 6042 [CCRC 21520, CCY 31-10-1, IFO 1588] |
Isolation | Lemonade |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Assembly Summary | |
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Date Published | March 27, 2025 |
Length | 11,386,125 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 11 (0 Circularized) |
N50 | 3,472,690 nt |
%GC | 44.45% |
Annotations Summary | |
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Number of BUSCO Annotations | 716 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 147,851 |
Oxford Nanopore Median Q Score | 33 |
Illumina Read Count | 31,806,334 |
Illumina Mean Coverage Depth | 361.802× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 31,806,334 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 94.5% |
Average depth of coverage | 361.802× |
This fungus was assembled, annotated, and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions