Assembly Summary | |
---|---|
Date Published | November 30, 2023 |
Length | 4,044,369 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 6 (3 Circularized) |
Assembly Level | None |
N50 | 2,986,010 nt |
%GC | 28.77% |
Organism Summary | |
---|---|
Name | ATCC® 51428™ |
Isolation | Termite gut (Cubitermes sp.) from Mayombe rainforest |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
---|---|
Number of CDS | 3,894 |
Number of Hypothetical Proteins | 627 |
Number of tRNA | 94 |
Number of 5s rRNA | 9 |
Number of 16s rRNA | 9 |
Number of 23s rRNA | 9 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 89,353 |
Oxford Nanopore Median Q Score | 26 |
Illumina Read Count | 11,284,882 |
Illumina Mean Coverage Depth | 410.215× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
---|
No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v1.2. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions