| Organism Summary | |
|---|---|
| Catalog Number | ATCC® 35150™ | 
| Strain Alias | EDL 931 | 
| Genotype | Multilocus Sequence Type (MLST): ST-32 | 
| Isolation | Feces | 
| Biosafety Level | 2 | 
| Type Strain | No | 
| Assembly Summary | |
|---|---|
| Date Published | February 26, 2020 | 
| Length | 5,550,512 nt | 
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly | 
| Number of Contigs | 10 (2 Circularized) | 
| N50 | 5,440,104 nt | 
| %GC | 50.44% | 
| Annotations Summary | |
|---|---|
| Number of CDS | 5419 | 
| Number of Hypothetical Proteins | 288 | 
| Number of tRNA | 102 | 
| Number of 5s rRNA | 8 | 
| Number of 16s rRNA | 7 | 
| Number of 23s rRNA | 7 | 
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 64,747 | 
| Oxford Nanopore Median Q Score | 22 | 
| Illumina Read Count | 4,820,886 | 
| Illumina Mean Coverage Depth | 170.356× | 
| Illumina Median Q Score | 38 | 
| Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump | 
|---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download | 
|---|
| Sequencing Quality Control | |
|---|---|
| Number of trimmed reads | 4,820,886 | 
| Median Q score, all bases | 38 | 
| Percent of median Q scores per cycle greater than 25 | 1% | 
| Ambiguous content (% N bases) | 0% | 
| Assembly Quality Control | |
|---|---|
| Estimated genome completeness | 99.97% | 
| Estimated genome contamination | 0.33% | 
| Illumina depth of coverage | 170.356× |