Organism Summary | |
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Catalog Number | ATCC® 33397™ |
Strain Alias | NCTC 10713 [ATCC 12395, CCUG 27298, CCUG 35776, CIP 102921, DSM 20563, HAMBI 1525, LMG 14502, Lancefield F68A] |
Isolation | Throat tissue |
Tags | Type Strain |
Biosafety Level | 2 |
Type Strain | Yes |
Antigenic Properties | Lancefield's group G |
Assembly Summary | |
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Date Published | October 30, 2019 |
Length | 1,955,308 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (All Circularized) |
N50 | 1,955,308 nt |
%GC | 38.71% |
Annotations Summary | |
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Number of CDS | 1856 |
Number of Hypothetical Proteins | 136 |
Number of tRNA | 59 |
Number of 5s rRNA | 4 |
Number of 16s rRNA | 4 |
Number of 23s rRNA | 4 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 171,107 |
Oxford Nanopore Median Q Score | 25 |
Illumina Read Count | 4,398,096 |
Illumina Mean Coverage Depth | 464.731× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 4,398,096 |
Median Q score, all bases | 38 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
Assembly Quality Control | |
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Estimated genome completeness | 100% |
Estimated genome contamination | 0% |
Average depth of coverage | 464.731× |