Organism Summary | |
---|---|
Catalog Number | ATCC® 200585™ |
Strain Alias | F102-2 |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
---|---|
Date Published | October 29, 2021 |
Length | 12,200,203 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 21 (0 Circularized) |
N50 | 796,876 nt |
%GC | 38.3% |
Annotations Summary | |
---|---|
Number of BUSCO Annotations | 734 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 409,566 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 21,134,758 |
Illumina Mean Coverage Depth | 225.803× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
---|
Sequencing Quality Control | |
---|---|
Number of trimmed reads | 21,134,758 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
---|---|
Estimated genome completeness | 89.18% |
Average depth of coverage | 225.803× |