Assembly Summary | |
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Date Published | March 24, 2025 |
Length | 3,842,177 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 2 (0 Circularized) |
N50 | 3,045,158 nt |
%GC | 35.51% |
Organism Summary | |
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Name | ATCC® TSD-466™ |
Tags |
Annotations Summary | |
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Number of CDS | 3555 |
Number of Hypothetical Proteins | 571 |
Number of tRNA | 43 |
Number of 5s rRNA | 5 |
Number of 16s rRNA | 5 |
Number of 23s rRNA | 5 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 15,489 |
Oxford Nanopore Median Q Score | 34 |
Illumina Read Count | 7,184,304 |
Illumina Mean Coverage Depth | 487.128× |
Illumina Median Q Score | 40 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions