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  • Thermus
  • Thermus thermophilus

Thermus thermophilus (ATCC® BAA-163™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Level
Date PublishedSeptember 2, 2021
Length2,143,708 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs2 (All Circularized)
Assembly SummaryComplete
N501,895,900 nt
%GC69.4%
Organism Summary
NameATCC® BAA-163™
Biosafety Level1
Type StrainNo
Annotations Summary
Number of CDS2,224
Number of Hypothetical Proteins905
Number of tRNA52
Number of 5s rRNA2
Number of 16s rRNA2
Number of 23s rRNA2
Input Reads Summary
Oxford Nanopore Read Count55,726
Oxford Nanopore Median Q Score21
Illumina Read Count24,431,499
Illumina Mean Coverage Depth1,557.987×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads24,431,499
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness99.58%
PassedEstimated genome contamination0%
PassedAverage depth of coverage1,557.987×
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