ATCC® 6051™ | Bacillus subtilis

Overview

Genome Browser

Related Genomes

Quality Control

Assembly Summary
Date Published	December 20, 2019
Length	4,295,427 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	2 (All Circularized)
N50	4,211,212 nt
%GC	43.34%

Organism Summary
Name	ATCC® 6051™
Strain Name	Marburg strain [ATCC 6051-U, CCM 2216, CCRC 10255, CCUG 163B, CFBP 4228, CIP 52.65, DSM 10, IAM 12118, IFO 12210, IFO 13719, IFO 16412, IMET 10758, JCM 1465, LMG 7135, NCAIM B.01095, NCCB 32009, NCCB 53016, NCCB 70064, NCFB 1769, NCIB 3610, NCTC 3610, NRR
Tags	Type Strain
Biosafety Level	1
Type Strain

Annotations Summary
Number of CDS	4408
Number of Hypothetical Proteins	494
Number of tRNA	88
Number of 5s rRNA	10
Number of 16s rRNA	10
Number of 23s rRNA	10

Input Reads Summary
Oxford Nanopore Read Count	4,070
Oxford Nanopore Median Q Score	14
Illumina Read Count	4,860,342
Illumina Mean Coverage Depth	273.006×
Illumina Median Q Score	38

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.

4 out of 4 passed

PassedNumber of trimmed reads4,860,342

PassedMedian Q score, all bases38

PassedPercent of median Q scores per cycle greater than 251%

PassedAmbiguous content (% N bases)0%

Metrics assessing the assembly quality

3 out of 3 passed

PassedEstimated genome completeness99.81%

PassedEstimated genome contamination0.35%

PassedAverage depth of coverage273.006×