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Overview
Annotations
Related Genomes
Quality Control
| Organism Summary | |
|---|---|
| Name | ATCC® 34921™ |
| Strain Name | NRRL 8044 [FERM-P 2796] |
| Isolation | Soil |
| Biosafety Level | 1 |
| Type Strain | No |
| Assembly Summary | |
|---|---|
| Date Published | December 22, 2020 |
| Length | 31,145,488 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 22 (0 Circularized) |
| N50 | 4,549,433 nt |
| %GC | 57.87% |
| Annotations Summary | |
|---|---|
| Number of BUSCO Annotations | 755 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 78,430 |
| Oxford Nanopore Median Q Score | 26 |
| Illumina Read Count | 59,839,232 |
| Illumina Mean Coverage Depth | 277.011× |
| Illumina Median Q Score | 37 |
| Contig | Start | End | Protein Product | Type | OrthoDB Group |
|---|
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
Number of trimmed reads59,839,232
Median Q score, all bases37
Percent of median Q scores per cycle greater than 251%
Ambiguous content (% N bases)0%
BUSCO Quality Control
Metrics assessing the assembly quality (from BUSCO).
2 out of 2 passed
PassedEstimated genome completeness98.94%
PassedAverage depth of coverage277.011×
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