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  • Lomentospora
  • Lomentospora prolificans

Lomentospora prolificans (ATCC® 64913™)

Overview
Annotations
Related Genomes
Quality Control
Assembly Summary
Date PublishedFebruary 25, 2023
Length36,804,997 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs59
Assembly LevelScaffold
N50970,557 nt
%GC51.08%
Organism Summary
NameATCC® 64913™
Genotype
IsolationBone biopsy of foot of boy with osteomyelitis
TagsType Strain
Biosafety Level2
Type StrainYes
Antigenic Properties
Annotations Summary
Number of BUSCO Annotations744
Input Reads Summary
Oxford Nanopore Read Count859,855
Oxford Nanopore Median Q Score24
Illumina Read Count72,466,527
Illumina Mean Coverage Depth258.659×
Illumina Median Q Score34
ContigStartEndProtein ProductTypeOrthoDB Group

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads72,466,527
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

BUSCO Quality Control

Metrics assessing the assembly quality (from BUSCO).
2/2
2 out of 2 passed
PassedEstimated genome completeness98.68%
PassedAverage depth of coverage258.659×
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