Purchased a strain from ATCC? Enter in the lot number to download the genome or learn more about our supporting memberships here.
Overview
Annotations
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | August 1, 2022 |
| Length | 23,396,781 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 36 (0 Circularized) |
| N50 | 1,618,050 nt |
| %GC | 47.07% |
| Organism Summary | |
|---|---|
| Name | ATCC® 24787™ |
| Isolation | Tinea capitis in Portuguese immigrant |
| Tags | |
| Biosafety Level | 2 |
| Type Strain | |
| Annotations Summary | |
|---|---|
| Number of BUSCO Annotations | 752 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 369,175 |
| Oxford Nanopore Median Q Score | 24 |
| Illumina Read Count | 57,047,008 |
| Illumina Mean Coverage Depth | 304.581× |
| Illumina Median Q Score | 34 |
| Contig | Start | End | Protein Product | Type | OrthoDB Group |
|---|
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
4 out of 4 passed
PassedNumber of trimmed reads57,047,008
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
BUSCO Quality Control
Metrics assessing the assembly quality (from BUSCO).
2 out of 2 passed
PassedEstimated genome completeness98.42%
PassedAverage depth of coverage304.581×
This website uses cookies to ensure you get the best experience on our website. Learn moreDecline