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- unclassified Schizochytrium
- Schizochytrium sp.
Schizochytrium sp. (ATCC® 20888™)
Overview
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | July 5, 2022 |
| Length | 40,396,572 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 37 |
| Assembly Level | Scaffold |
| N50 | 1,570,208 nt |
| %GC | 56.71% |
| Organism Summary | |
|---|---|
| Name | ATCC® 20888™ |
| Isolation | Estuarine water |
| Biosafety Level | 1 |
| Type Strain | No |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 789,993 |
| Oxford Nanopore Median Q Score | 23 |
| Illumina Read Count | 96,520,241 |
| Illumina Mean Coverage Depth | 316.845× |
| Illumina Median Q Score | 34 |
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
4 out of 4 passed
PassedNumber of trimmed reads96,520,241
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
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