Assembly Summary | |
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Date Published | February 26, 2020 |
Length | 1,852,980 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (0 Circularized) |
Assembly Level | None |
N50 | 1,852,980 nt |
%GC | 63.78% |
Organism Summary | |
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Name | ATCC® 49978™ |
Isolation | Upflow anaerobic sludge bed reactor of a sugar refinery |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 1,825 |
Number of Hypothetical Proteins | 196 |
Number of tRNA | 50 |
Number of 5s rRNA | 3 |
Number of 16s rRNA | 3 |
Number of 23s rRNA | 3 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 264,125 |
Oxford Nanopore Median Q Score | 21 |
Illumina Read Count | 1,377,705 |
Illumina Mean Coverage Depth | 106.225× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.