Assembly Summary | |
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Date Published | September 4, 2024 |
Length | 3,804,531 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 10 (1 Circularized) |
Assembly Level | Chromosome |
N50 | 3,272,567 nt |
%GC | 44.73% |
Organism Summary | |
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Name | ATCC® 700303™ |
Isolation | Sugar beet extraction juice; isolated 1991/1992 |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 3,808 |
Number of Hypothetical Proteins | 591 |
Number of tRNA | 112 |
Number of 5s rRNA | 10 |
Number of 16s rRNA | 11 |
Number of 23s rRNA | 11 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 21,666 |
Oxford Nanopore Median Q Score | 33 |
Illumina Read Count | 11,051,592 |
Illumina Mean Coverage Depth | 430.449× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions