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- Streptomyces albidoflavus group
- Streptomyces coelicolor
Streptomyces coelicolor (ATCC® 10147™)
Overview
Genome Browser
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | September 29, 2020 |
| Length | 8,553,936 nt |
| Sequencing Technology | Illumina + Oxford Nanopore |
| Number of Contigs | 7 (0 Circularized) |
| Assembly Level | Chromosome |
| N50 | 8,490,421 nt |
| %GC | 72.16% |
| Organism Summary | |
|---|---|
| Name | ATCC® 10147™ |
| Biosafety Level | 1 |
| Type Strain | No |
| Annotations Summary | |
|---|---|
| Number of CDS | 7,694 |
| Number of Hypothetical Proteins | 1,018 |
| Number of tRNA | 66 |
| Number of 5s rRNA | 6 |
| Number of 16s rRNA | 6 |
| Number of 23s rRNA | 6 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 737,877 |
| Oxford Nanopore Median Q Score | 22 |
| Illumina Read Count | 5,769,872 |
| Illumina Mean Coverage Depth | 103.692× |
| Illumina Median Q Score | 38 |
| Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
|---|
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
4 out of 4 passed
PassedNumber of trimmed reads5,769,872
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
Assembly Quality Control
Metrics assessing the assembly quality
3 out of 3 passed
PassedEstimated genome completeness99.57%
PassedEstimated genome contamination0.43%
PassedAverage depth of coverage103.692×
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