Organism Summary | |
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Catalog Number | ATCC® MYA-5003™ |
Strain Alias | B11244 |
Isolation | Human blood |
Biosafety Level | 2 |
Type Strain | No |
Assembly Summary | |
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Date Published | January 26, 2021 |
Length | 12,484,079 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 8 (0 Circularized) |
N50 | 2,327,047 nt |
%GC | 45.24% |
Annotations Summary | |
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Number of BUSCO Annotations | 724 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 90,687 |
Oxford Nanopore Median Q Score | 26 |
Illumina Read Count | 262,322,504 |
Illumina Mean Coverage Depth | 2,579.835× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 262,322,504 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 91.29% |
Average depth of coverage | 2,579.835× |