Assembly Summary | |
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Date Published | April 29, 2024 |
Length | 5,033,733 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 7 (3 Circularized) |
N50 | 3,565,133 nt |
%GC | 50.79% |
Organism Summary | |
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Name | ATCC® BAA-3340™ |
Isolation | Cattle fecal grab |
Tags | |
Biosafety Level | 2 |
Type Strain |
Annotations Summary | |
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Number of CDS | 4829 |
Number of Hypothetical Proteins | 176 |
Number of tRNA | 83 |
Number of 5s rRNA | 7 |
Number of 16s rRNA | 6 |
Number of 23s rRNA | 6 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 79,034 |
Oxford Nanopore Median Q Score | 36 |
Illumina Read Count | 7,809,522 |
Illumina Mean Coverage Depth | 229.864× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions