Assembly Summary | |
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Date Published | February 26, 2020 |
Length | 3,944,166 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 13 (3 Circularized) |
Assembly Level | Chromosome |
N50 | 2,164,482 nt |
%GC | 66.32% |
Organism Summary | |
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Name | ATCC® 49037™ |
Isolation | Sugarcane roots |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 3,691 |
Number of Hypothetical Proteins | 525 |
Number of tRNA | 56 |
Number of 5s rRNA | 4 |
Number of 16s rRNA | 4 |
Number of 23s rRNA | 4 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 72,883 |
Oxford Nanopore Median Q Score | 16 |
Illumina Read Count | 4,025,859 |
Illumina Mean Coverage Depth | 183.029× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.