| Organism Summary | |
|---|---|
| Catalog Number | ATCC® 15545™ | 
| Strain Alias | NRRL YB-4025 [ATCC 34972] | 
| Isolation | Young woman with fatal septicemia | 
| Biosafety Level | 1 | 
| Type Strain | No | 
| Assembly Summary | |
|---|---|
| Date Published | December 22, 2020 | 
| Length | 12,561,960 nt | 
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly | 
| Number of Contigs | 18 (0 Circularized) | 
| N50 | 930,649 nt | 
| %GC | 38.87% | 
| Annotations Summary | |
|---|---|
| Number of BUSCO Annotations | 719 | 
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 149,641 | 
| Oxford Nanopore Median Q Score | 28 | 
| Illumina Read Count | 16,130,402 | 
| Illumina Mean Coverage Depth | 170.531× | 
| Illumina Median Q Score | 37 | 
| Contig | Start | End | Protein Product | Type | OrthoDB Group | 
|---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download | 
|---|
| Sequencing Quality Control | |
|---|---|
| Number of trimmed reads | 16,130,402 | 
| Median Q score, all bases | 37 | 
| Percent of median Q scores per cycle greater than 25 | 1% | 
| Ambiguous content (% N bases) | 0% | 
| BUSCO Quality Control | |
|---|---|
| Estimated genome completeness | 87.73% | 
| Average depth of coverage | 170.531× |