- Pseudogymnoascus destructans
- Pseudogymnoascus destructans 20631-21
Pseudogymnoascus destructans 20631-21 (ATCC® MYA-4855™)
Overview
Annotations
Related Genomes
Quality Control
| Assembly Summary | |
|---|---|
| Date Published | December 22, 2020 |
| Length | 34,550,312 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 65 |
| Assembly Level | Scaffold |
| N50 | 2,229,487 nt |
| %GC | 49.33% |
| Organism Summary | |
|---|---|
| Name | ATCC® MYA-4855™ |
| Isolation | Wing skin of little brown bat, Myotis lucifugus, from Williams Hotel Mine in Ulster County; isolated February 2008 |
| Tags | Type Strain |
| Biosafety Level | 2 |
| Type Strain | Yes |
| Annotations Summary | |
|---|---|
| Number of BUSCO Annotations | 746 |
| Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 610,435 |
| Oxford Nanopore Median Q Score | 25 |
| Illumina Read Count | 58,402,973 |
| Illumina Mean Coverage Depth | 237.536× |
| Illumina Median Q Score | 37 |
| Contig | Start | End | Protein Product | Type | OrthoDB Group |
|---|
Most similar genomes
No genomes with >95% similarity found.
Other members of this genus
No genomes found sharing the same genus.
Sequencing Quality Control
Quality control statistics on Illumina sequencing data.
4 out of 4 passed
PassedNumber of trimmed reads58,402,973
PassedMedian Q score, all bases37
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%
BUSCO Quality Control
Metrics assessing the assembly quality (from BUSCO).
2 out of 2 passed
PassedEstimated genome completeness98.55%
PassedAverage depth of coverage237.536×
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