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  • Orthopoxvirus
  • Monkeypox virus

Monkeypox virus (ATCC® VR-3371™)

Overview
Related Genomes
Quality Control
Assembly Summary
Date PublishedFebruary 28, 2023
Length191,073 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Segments3
Assembly LevelComplete
N50184,670 nt
%GC32.89%
Organism Summary
NameATCC® VR-3371™
IsolationHuman, May 2022
Biosafety Level3
Input Reads Summary
Illumina Read Count1,128,620
Illumina Mean Coverage Depth120.333×
Illumina Median Q Score39

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
3/3
3 out of 3 passed
PassedMedian Q score, all bases39
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Notes

This virus was manually assembled and curated, due to its automated assembly not meeting our reference-based quality filtering. See our technical documentation for further details: http://docs.onecodex.com/en/articles/3996287-genome-assembly

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