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  • Pichia kudriavzevii

Pichia kudriavzevii (ATCC® 6258™)

Overview
Annotations
Related Genomes
Quality Control
Assembly Level
Date PublishedDecember 22, 2020
Length10,895,685 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs11
Assembly SummaryScaffold
N501,357,941 nt
%GC38.31%
Organism Summary
NameATCC® 6258™
IsolationSputum of patient with bronchomycosis
TagsType Strain
Biosafety Level1
Type StrainYes
Annotations Summary
Number of BUSCO Annotations602
Input Reads Summary
Oxford Nanopore Read Count303,062
Oxford Nanopore Median Q Score25
Illumina Read Count11,616,057
Illumina Mean Coverage Depth250.927×
Illumina Median Q Score38
ContigStartEndProtein ProductTypeOrthoDB Group

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads11,616,057
PassedMedian Q score, all bases38
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

BUSCO Quality Control

Metrics assessing the assembly quality (from BUSCO).
1/2
1 out of 2 passed, 1 requires inspection
CautionEstimated genome completeness79.55%
PassedAverage depth of coverage250.927×
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