Organism Summary | |
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Catalog Number | ATCC® 90905™ |
Strain Alias | DX571-57 |
Genotype | leu2 xpr6-13 xrn1-1 Ura- A |
Isolation | Cross between DX563-24 and DX5141-1 |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | September 5, 2023 |
Length | 20,911,299 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 8 (0 Circularized) |
N50 | 3,878,080 nt |
%GC | 49.01% |
Annotations Summary | |
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Number of BUSCO Annotations | 742 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 219,030 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 28,420,941 |
Illumina Mean Coverage Depth | 171.47× |
Illumina Median Q Score | 34 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 28,420,941 |
Median Q score, all bases | 34 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 97.23% |
Average depth of coverage | 171.47× |