Organism Summary | |
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Catalog Number | ATCC® 9545™ |
Strain Alias | 846 [NRRL B-2605] |
Isolation | Foul brood of honey bees |
Tags | Methylation DataType Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Assembly Summary | |
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Date Published | September 29, 2020 |
Length | 4,288,592 nt |
Sequencing Technology | Illumina + Oxford Nanopore |
Number of Contigs | 2 (All Circularized) |
N50 | 4,287,327 nt |
%GC | 44.17% |
Annotations Summary | |
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Number of CDS | 4359 |
Number of Hypothetical Proteins | 817 |
Number of tRNA | 80 |
Number of 5s rRNA | 8 |
Number of 16s rRNA | 8 |
Number of 23s rRNA | 8 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 122,320 |
Oxford Nanopore Median Q Score | 26 |
Illumina Read Count | 5,080,208 |
Illumina Mean Coverage Depth | 223.51× |
Illumina Median Q Score | 38 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 5,080,208 |
Median Q score, all bases | 38 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
Assembly Quality Control | |
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Estimated genome completeness | 99.09% |
Estimated genome contamination | 0% |
Average depth of coverage | 223.51× |