Organism Summary | |
---|---|
Catalog Number | ATCC® 27773™ |
Strain Alias | 9782, 7469 [NCIB 10463] |
Isolation | Derived from existing strain |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
---|---|
Date Published | June 10, 2025 |
Length | 2,925,362 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (All Circularized) |
N50 | 2,925,362 nt |
%GC | 46.78% |
Annotations Summary | |
---|---|
Number of CDS | 2612 |
Number of Hypothetical Proteins | 278 |
Number of tRNA | 60 |
Number of 5s rRNA | 5 |
Number of 16s rRNA | 5 |
Number of 23s rRNA | 5 |
Input Reads Summary | |
---|---|
Oxford Nanopore Read Count | 216,336 |
Oxford Nanopore Median Q Score | 42 |
Illumina Read Count | 11,593,464 |
Illumina Mean Coverage Depth | 584.255× |
Illumina Median Q Score | 40 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
---|
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
---|
Sequencing Quality Control | |
---|---|
Number of trimmed reads | 11,593,464 |
Median Q score, all bases | 40 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
Assembly Quality Control | |
---|---|
Estimated genome completeness | 98.4% |
Estimated genome contamination | 0.37% |
Average depth of coverage | 584.255× |
This bacterium was assembled, annotated, and curated using Oatmeal v3.0. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions