Organism Summary | |
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Catalog Number | ATCC® 38163™ |
Strain Alias | G00 [ATCC 12996, ATCC 26451, C. Thom 5616.1, CBS 112.46, FGSC A4, Glasgow wild-type, Pontecorvo strain, IMI 38576ii, NRRL 194, SRRC 273, WB 194, Yuill A69, biA-1] |
Genotype | argB |
Biosafety Level | 1 |
Type Strain | No |
Assembly Summary | |
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Date Published | October 30, 2020 |
Length | 30,310,024 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 12 (0 Circularized) |
N50 | 3,468,257 nt |
%GC | 50.05% |
Annotations Summary | |
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Number of BUSCO Annotations | 755 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 880,171 |
Oxford Nanopore Median Q Score | 24 |
Illumina Read Count | 37,538,311 |
Illumina Mean Coverage Depth | 176.953× |
Illumina Median Q Score | 37 |
Contig | Start | End | Protein Product | Type | OrthoDB Group |
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The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length | Download |
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Sequencing Quality Control | |
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Number of trimmed reads | 37,538,311 |
Median Q score, all bases | 37 |
Percent of median Q scores per cycle greater than 25 | 1% |
Ambiguous content (% N bases) | 0% |
BUSCO Quality Control | |
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Estimated genome completeness | 98.42% |
Average depth of coverage | 176.953× |