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  • Aeromonas
  • Aeromonas allosaccharophila

Aeromonas allosaccharophila (ATCC® 51208™)

Overview
Genome Browser
Related Genomes
Quality Control
Assembly Summary
Date PublishedDecember 21, 2022
Length4,798,866 nt
Sequencing TechnologyIllumina + Oxford Nanopore Hybrid Assembly
Number of Contigs4 (2 Circularized)
Assembly LevelChromosome
N504,722,531 nt
%GC58.31%
Organism Summary
NameATCC® 51208™
Genotype
IsolationDiseased elvers, Anguilla anguilla
TagsType Strain
Biosafety Level1
Type StrainYes
Antigenic Properties
Annotations Summary
Number of CDS4,231
Number of Hypothetical Proteins1,562
Number of tRNA124
Number of 5s rRNA11
Number of 16s rRNA10
Number of 23s rRNA10
Input Reads Summary
Oxford Nanopore Read Count106,771
Oxford Nanopore Median Q Score24
Illumina Read Count11,115,297
Illumina Mean Coverage Depth321.01×
Illumina Median Q Score34
ContigStartEndNameProtein ProductEC NumberTypeUniprot IDJump

Most similar genomes

No genomes with >95% similarity found.

Other members of this genus

No genomes found sharing the same genus.

Sequencing Quality Control

Quality control statistics on Illumina sequencing data.
4/4
4 out of 4 passed
PassedNumber of trimmed reads11,115,297
PassedMedian Q score, all bases34
PassedPercent of median Q scores per cycle greater than 25100%
PassedAmbiguous content (% N bases)0%

Assembly Quality Control

Metrics assessing the assembly quality (from CheckM).
3/3
3 out of 3 passed
PassedEstimated genome completeness100%
PassedEstimated genome contamination0%
PassedAverage depth of coverage321.01×
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