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Overview
Annotations
Related Genomes
Quality Control
Organism Summary | |
|---|---|
| Catalog Number | ATCC® 90039™ |
| Strain Alias | CBS 2479 [JCM 2466] |
| Isolation | Skin |
| Tags | Type Strain |
| Biosafety Level | 2 |
| Type Strain | Yes |
Assembly Summary | |
|---|---|
| Date Published | August 8, 2023 |
| Length | 25,088,815 nt |
| Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
| Number of Contigs | 44 (0 Circularized) |
| N50 | 1,023,187 nt |
| %GC | 59.57% |
Annotations Summary | |
|---|---|
| Number of BUSCO Annotations | 736 |
Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 1,966,224 |
| Oxford Nanopore Median Q Score | 23 |
| Illumina Read Count | 24,860,592 |
| Illumina Mean Coverage Depth | 126.624× |
| Illumina Median Q Score | 34 |
| Contig | Start | End | Protein Product | Type | OrthoDB Group |
|---|
Most similar genomes
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
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| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length |
|---|
Displaying Genome
Sequencing Quality Control
Sequencing Quality Control Metrics | |
|---|---|
| Number of trimmed reads | 24,860,592 |
| Median Q score, all bases | 34 |
| Percent of median Q scores per cycle greater than 25 | 1% |
| Ambiguous content (% N bases) | 0% |
BUSCO Quality Control
BUSCO Quality Control Metrics | |
|---|---|
| Estimated genome completeness | 90.63% |
| Average depth of coverage | 126.624× |
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