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Overview
Related Genomes
Quality Control
Organism Summary | |
|---|---|
| Catalog Number | ATCC® VR-766™ |
| Strain Alias | MHV-S Log #3239/17 |
| Isolation | Isolated by i.c. and i.p. passage of viscera of 8 sick CD-1 mice in infant and suckling mice. |
| Biosafety Level | 2 |
Assembly Summary | |
|---|---|
| Date Published | December 13, 2022 |
| Length | 31,033 nt |
| Sequencing Technology | Illumina |
| Number of Contigs | 1 (0 Circularized) |
| Assembly Level | Complete |
| N50 | 31,033 nt |
| %GC | 41.77% |
Input Reads Summary | |
|---|---|
| Oxford Nanopore Read Count | 0 |
| Oxford Nanopore Median Q Score | 0 |
| Illumina Read Count | 1,046,757 |
| Illumina Mean Coverage Depth | 185.032× |
| Illumina Median Q Score | 38 |
Most similar genomes
The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):
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| Taxonomic Name | ATCC Product Page | Strain Alias | Tags | Date Published | Length |
|---|
Displaying Genome
Sequencing Quality Control
Sequencing Quality Control Metrics | |
|---|---|
| Median Q score, all bases | 38 |
| Percent of median Q scores per cycle greater than 25 | 1% |
| Ambiguous content (% N bases) | 0% |
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