Assembly Summary | |
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Date Published | September 13, 2024 |
Length | 9,246,597 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 5 (2 Circularized) |
Assembly Level | Chromosome |
N50 | 4,814,204 nt |
%GC | 71.22% |
Organism Summary | |
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Name | ATCC® 49415™ |
Isolation | Soil |
Tags | Type Strain |
Biosafety Level | 1 |
Type Strain | Yes |
Annotations Summary | |
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Number of CDS | 8,434 |
Number of Hypothetical Proteins | 1,376 |
Number of tRNA | 76 |
Number of 5s rRNA | 3 |
Number of 16s rRNA | 3 |
Number of 23s rRNA | 3 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 25,481 |
Oxford Nanopore Median Q Score | 33 |
Illumina Read Count | 13,690,456 |
Illumina Mean Coverage Depth | 216.577× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.
This bacterium was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions