ATCC® 24725™ | Phanerochaete chrysosporium

Overview

Annotations

Related Genomes

Quality Control

Organism Summary
Catalog Number	ATCC® 24725™
Strain Alias	VKM F-1767 [CBS 481.73, CCRC 36200, IMI 174727, NRRL 6361, QM 9998]
Isolation	Fruit and petiole of grape, Vitis vinifera
Tags	Type Strain
Biosafety Level	1
Type Strain	Yes

Assembly Summary
Date Published	June 10, 2025
Length	37,091,852 nt
Sequencing Technology	Illumina + Oxford Nanopore Hybrid Assembly
Number of Contigs	162 (0 Circularized)
N50	414,202 nt
%GC	56.55%

Annotations Summary
Number of BUSCO Annotations	755

Input Reads Summary
Oxford Nanopore Read Count	645,176
Oxford Nanopore Median Q Score	33
Illumina Read Count	75,628,748
Illumina Mean Coverage Depth	297.499×
Illumina Median Q Score	40

The following genomes have the greatest genomic similarity to this one (≥95% average nucleotide identity):

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		Taxonomic Name	ATCC Product Page	Strain Alias	Tags	Date Published	Length

Displaying Genome

Sequencing Quality Control

Sequencing Quality Control Metrics
Number of trimmed reads	75,628,748
Median Q score, all bases	40
Percent of median Q scores per cycle greater than 25	1%
Ambiguous content (% N bases)	0%

BUSCO Quality Control Metrics
Estimated genome completeness	99.6%
Average depth of coverage	297.499×

This fungus was assembled, annotated, and curated using Oatmeal v2.1. See our technical documentation for further details: https://docs.onecodex.com/en/articles/5357065-assembly-qc-and-annotation-pipeline-versions